Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014298.1 Corchorus olitorius cultivar O-4 contig14331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11431

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
399--1853
332
4.4
327
79
7
1481
33
14
16
35
1.89
2004--2084
31
2.7
29
75
11
74
35
13
24
25
1.92
4745--4796
22
2.4
22
86
0
77
32
21
26
19
1.97
4818--5495
31
22.4
31
94
2
969
44
17
15
22
1.86
8944--8977
16
2.1
16
100
0
68
29
35
0
35
1.58
10374--10407
13
2.6
13
85
0
50
35
5
20
38
1.77

Tables:   1

The End!