Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000143.1 Corchorus olitorius cultivar O-4 contig00143, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1086

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--675
22
30.6
21
68
13
177
37
18
8
35
1.82
159--566
44
9.3
43
70
14
223
37
18
10
34
1.85
183--285
46
2.3
44
83
3
125
37
15
14
32
1.88
771--812
22
1.9
22
90
0
66
28
26
9
35
1.88
772--822
22
2.3
22
83
6
59
31
25
9
33
1.88
931--1036
22
4.8
22
80
2
122
34
18
9
36
1.84

Tables:   1

The End!