Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014303.1 Corchorus olitorius cultivar O-4 contig14336, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21938

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1782
331
5.4
330
85
4
2338
33
14
16
34
1.90
5--1781
661
2.7
659
84
5
2331
33
15
16
34
1.90
1813--4253
328
7.5
328
79
6
2338
33
15
16
34
1.91
1790--4253
658
3.8
653
83
4
2797
33
15
16
34
1.91
7125--7149
7
3.6
7
100
0
50
88
0
12
0
0.53
12380--12407
12
2.3
12
100
0
56
57
0
0
42
0.99
12520--12562
16
2.6
16
88
7
59
79
0
13
6
0.93
12526--12576
6
8.5
6
76
6
50
78
0
15
5
0.93
21871--21901
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!