Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014304.1 Corchorus olitorius cultivar O-4 contig14337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90789

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1699--1724
7
3.7
7
100
0
52
0
42
0
57
0.98
14641--14756
57
2.0
57
96
0
214
33
25
1
39
1.66
27896--27928
15
2.2
15
94
0
57
63
6
0
30
1.18
53629--53654
2
13.0
2
100
0
52
50
0
0
50
1.00
56354--56390
2
18.5
2
100
0
74
48
0
0
51
1.00
58231--58281
26
2.0
26
96
0
93
33
23
11
31
1.91
71480--71504
12
2.1
12
100
0
50
40
8
28
24
1.83
85809--85894
42
2.0
42
93
0
145
15
23
43
18
1.88

Tables:   1

The End!