Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014311.1 Corchorus olitorius cultivar O-4 contig14344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13930

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2151--2188
14
2.8
13
88
11
58
39
0
2
57
1.12
2284--2660
202
1.9
192
87
6
540
35
15
15
33
1.89
2795--2839
20
2.2
20
92
0
72
22
13
24
40
1.90
4523--4577
21
2.6
21
88
0
83
12
23
47
16
1.81
8194--8233
15
2.6
16
88
4
55
62
7
10
20
1.50
11898--12512
307
2.0
307
97
0
1149
20
19
16
43
1.88
13811--13875
27
2.4
27
82
5
78
38
26
18
16
1.92

Tables:   1

The End!