Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014312.1 Corchorus olitorius cultivar O-4 contig14345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31858

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13183--13336
69
2.2
70
85
1
220
18
29
23
27
1.98
16890--16925
19
1.9
18
88
5
54
30
22
5
41
1.76
17497--17527
3
10.3
3
92
0
53
32
32
0
35
1.58
25594--25733
37
3.9
36
87
5
212
35
15
17
32
1.91
25693--25756
28
2.3
28
97
0
119
34
14
17
34
1.89
25594--25733
74
1.9
71
92
4
235
35
15
17
32
1.91
25721--25860
52
2.7
52
93
0
235
36
16
15
31
1.90
29601--29649
21
2.3
21
83
10
64
65
6
10
18
1.43

Tables:   1

The End!