Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014314.1 Corchorus olitorius cultivar O-4 contig14347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3699

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
445--708
132
2.0
132
100
0
528
40
10
8
40
1.70
780--899
39
3.1
39
95
1
204
50
8
4
37
1.52
824--885
17
3.4
17
72
20
61
50
11
4
33
1.60
890--939
26
2.0
25
92
4
82
28
4
12
56
1.54
1937--2006
36
1.9
36
91
0
113
60
8
10
21
1.55
3269--3383
58
2.0
58
84
3
151
33
21
14
30
1.94

Tables:   1

The End!