Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014326.1 Corchorus olitorius cultivar O-4 contig14359, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17244

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--63
33
1.9
33
87
6
92
19
41
31
7
1.80
1290--1333
22
2.0
22
95
4
81
50
0
13
36
1.42
6218--6319
40
2.5
40
98
0
195
29
6
17
46
1.74
6479--6766
89
3.2
89
94
0
504
32
17
24
26
1.97
6478--6800
178
1.8
178
90
1
522
31
17
25
25
1.97
10902--10972
37
1.9
37
94
0
124
36
16
8
38
1.80
12084--12124
20
2.0
20
95
0
73
34
17
9
39
1.82

Tables:   1

The End!