Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014329.1 Corchorus olitorius cultivar O-4 contig14362, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28764

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6431--6500
32
2.1
35
86
7
101
48
8
12
30
1.71
6499--6531
16
2.1
16
94
0
57
39
12
6
42
1.67
6995--7069
38
2.0
38
94
0
132
37
2
18
41
1.65
9508--9576
31
2.1
33
86
7
97
42
17
33
7
1.77
11128--11185
31
1.9
31
86
10
84
17
12
31
39
1.86
14887--14978
48
1.9
48
90
0
148
35
30
15
18
1.92
18193--18248
27
2.1
27
89
0
85
37
28
16
17
1.91
26436--26486
24
2.1
25
92
3
86
15
9
31
43
1.80
26467--26500
16
2.1
16
100
0
68
17
17
29
35
1.93
26851--26885
17
2.1
17
89
5
54
2
11
8
77
1.10
27450--27514
18
3.6
18
95
0
112
23
24
21
30
1.99

Tables:   1

The End!