Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014342.1 Corchorus olitorius cultivar O-4 contig14375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29245

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142--171
15
2.1
15
93
6
53
66
6
13
13
1.43
6380--6430
22
2.4
20
87
9
66
58
7
7
25
1.53
8229--8267
18
2.1
18
85
4
51
43
15
15
25
1.86
15092--15206
54
2.2
53
90
3
178
22
22
17
37
1.94
15104--15206
27
3.8
27
92
0
170
22
21
18
37
1.94
16523--16548
13
2.0
13
100
0
52
38
23
0
38
1.55
24645--25274
72
8.8
72
86
1
863
21
26
19
32
1.97
24637--25274
144
4.4
144
90
2
1007
21
26
19
32
1.97
28889--28977
29
3.1
29
85
0
97
13
15
23
47
1.81

Tables:   1

The End!