Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014343.1 Corchorus olitorius cultivar O-4 contig14376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4827

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2221--2756
36
16.3
35
72
16
199
19
20
18
42
1.90
2344--2759
36
12.5
36
75
15
403
18
19
19
42
1.89
2388--2589
62
3.1
62
81
12
269
16
19
19
43
1.88
2424--2482
26
2.3
26
90
0
91
16
22
20
40
1.91
2344--2759
169
2.5
166
86
5
555
18
19
19
42
1.89
2450--2681
71
3.4
72
85
8
281
17
18
20
43
1.88
2222--2681
133
3.5
133
82
5
451
18
20
18
43
1.89
2560--2737
61
2.9
61
89
0
257
20
19
19
39
1.92
2659--2711
26
2.1
26
82
3
63
20
20
18
39
1.92
3022--3891
30
29.1
30
88
2
1178
19
13
18
48
1.81
3973--4059
39
2.2
39
77
4
95
24
14
13
47
1.81
4400--4453
27
1.9
28
88
7
83
16
16
27
38
1.90
4407--4476
29
2.5
28
80
11
72
14
15
24
45
1.83

Tables:   1

The End!