Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014346.1 Corchorus olitorius cultivar O-4 contig14379, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37220

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1869--1922
16
3.2
16
78
14
63
46
16
7
29
1.74
3146--3190
15
3.0
15
90
0
72
28
31
6
33
1.83
11212--11656
231
1.9
231
86
8
634
33
11
13
40
1.81
14970--15020
23
2.2
23
82
0
57
7
3
21
66
1.34
15148--15232
37
2.3
37
93
0
143
35
4
7
52
1.49
19299--19354
21
2.7
21
83
5
69
21
25
12
41
1.88
20687--21195
178
2.9
176
82
4
601
34
14
15
36
1.88
21850--22024
67
2.6
67
87
1
244
31
18
9
40
1.83

Tables:   1

The End!