Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014353.1 Corchorus olitorius cultivar O-4 contig14386, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37341

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1265
632
2.0
630
98
0
2440
35
18
13
31
1.90
3386--4704
214
6.2
211
82
4
1342
39
15
16
28
1.89
3490--4672
429
2.8
426
82
5
1364
38
15
17
28
1.89
6037--6085
17
2.9
17
80
11
57
22
6
18
53
1.66
23287--23311
2
12.5
2
100
0
50
0
48
0
52
1.00
24424--24714
39
7.6
39
90
4
432
44
11
27
16
1.82
24424--24714
75
3.8
77
89
4
421
44
11
27
16
1.82
24424--24714
114
2.6
114
93
1
485
44
11
27
16
1.82
28307--28381
38
2.0
38
100
0
150
29
17
13
40
1.87
34716--34776
28
2.2
28
82
11
72
37
14
4
42
1.68
35883--36294
203
2.0
204
95
2
740
36
10
8
43
1.71
37050--37119
36
1.9
36
88
0
104
61
8
8
21
1.52

Tables:   1

The End!