Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014356.1 Corchorus olitorius cultivar O-4 contig14389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18068

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2235--2279
11
4.0
11
82
2
54
20
15
17
46
1.84
2243--2284
22
1.9
22
90
9
68
16
14
16
52
1.75
3746--3790
23
2.0
23
86
0
63
31
15
13
40
1.86
4513--4606
45
2.0
47
91
4
156
45
23
10
20
1.82
6293--6321
13
2.1
14
93
6
51
20
20
20
37
1.94
7596--7621
11
2.4
11
100
0
52
23
0
0
76
0.78
8235--8275
21
1.9
22
85
5
57
41
31
17
9
1.82
16038--16125
26
3.2
26
68
22
79
48
10
6
34
1.63
16010--16126
58
2.0
58
100
0
234
47
8
9
34
1.66
16315--16408
2
47.0
2
79
16
79
50
4
2
43
1.33
16320--16394
26
2.8
26
88
10
98
52
2
2
42
1.29
16624--16704
39
2.0
40
92
2
137
50
8
3
37
1.51
16695--16741
25
1.9
24
91
4
76
31
6
8
53
1.57
17730--17799
36
1.9
36
91
0
113
60
8
10
21
1.55

Tables:   1

The End!