Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014362.1 Corchorus olitorius cultivar O-4 contig14395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30368

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1382--1951
22
25.6
23
70
15
193
37
10
17
35
1.83
1558--1647
46
1.9
47
88
4
137
43
10
18
27
1.82
14253--14317
34
1.9
34
96
0
121
20
13
26
40
1.89
18815--18862
25
1.9
25
86
0
69
58
14
6
20
1.58
18977--19009
16
1.9
18
88
11
52
12
6
27
54
1.60
28588--28630
13
3.3
13
84
9
52
18
6
16
58
1.60
30269--30354
2
43.0
2
100
0
172
50
0
50
0
1.00

Tables:   1

The End!