Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014363.1 Corchorus olitorius cultivar O-4 contig14396, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22938

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
457--481
13
1.9
13
100
0
50
0
32
0
68
0.90
453--499
18
2.6
18
77
16
51
2
29
2
65
1.15
10016--10079
31
2.1
30
91
2
101
37
18
7
35
1.80
12850--12889
13
3.1
13
85
0
53
45
15
15
25
1.84
13097--13126
15
1.9
16
93
6
53
20
6
10
63
1.47
13163--13283
41
3.0
41
77
13
133
38
16
13
31
1.87
13560--13615
28
2.0
28
100
0
112
32
28
14
25
1.94

Tables:   1

The End!