Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014369.1 Corchorus olitorius cultivar O-4 contig14402, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7348

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
587--640
26
2.0
28
89
7
85
14
12
9
62
1.53
1053--1231
86
2.1
86
94
1
313
31
10
9
48
1.70
1220--1275
22
2.6
22
72
13
53
26
8
12
51
1.69
1312--1362
23
2.3
23
75
3
59
19
7
21
50
1.72
1616--1689
22
3.5
22
75
3
62
33
12
8
45
1.71
1638--1693
22
2.6
22
82
2
69
30
10
7
51
1.63
6805--6849
24
1.9
24
81
4
56
40
17
8
33
1.81

Tables:   1

The End!