Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014370.1 Corchorus olitorius cultivar O-4 contig14403, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24230

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
758--815
6
9.7
6
75
7
55
22
29
27
20
1.99
758--815
12
4.8
12
81
8
73
22
29
27
20
1.99
2886--2932
2
21.5
2
83
16
58
44
0
8
46
1.33
2889--2935
9
5.2
9
100
0
94
44
0
10
44
1.38
8133--8163
15
2.1
14
94
5
53
58
0
0
41
0.98
10765--10804
21
2.0
20
85
5
53
32
22
25
20
1.98
19497--19529
16
2.1
16
100
0
66
24
12
18
45
1.83
20567--20648
40
1.9
45
80
11
102
36
2
2
58
1.24
22609--22650
18
2.3
18
88
8
59
33
7
23
35
1.82

Tables:   1

The End!