Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014373.1 Corchorus olitorius cultivar O-4 contig14406, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30772

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5534--5622
46
2.0
46
88
2
135
46
16
10
26
1.79
6457--6518
31
2.0
31
100
0
124
54
12
3
29
1.53
12958--13064
31
3.5
30
71
14
103
33
20
19
26
1.97
12994--13093
29
3.4
29
74
15
114
32
21
20
27
1.97
12962--13095
60
2.2
60
95
0
241
33
20
19
26
1.96
13135--13300
31
5.5
29
72
11
138
27
18
18
34
1.95
13135--13296
60
2.7
60
87
3
254
27
18
18
35
1.94
13161--13296
29
4.6
29
72
14
107
27
17
18
36
1.94
18766--18812
6
7.8
6
100
0
94
17
17
17
48
1.81

Tables:   1

The End!