Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014374.1 Corchorus olitorius cultivar O-4 contig14407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14155

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2495--2524
6
5.0
6
91
0
51
33
16
20
30
1.94
2589--2644
27
2.1
27
93
0
94
35
14
16
33
1.88
4736--4830
15
6.3
15
80
0
109
27
28
14
29
1.95
4733--4834
45
2.3
45
84
3
125
27
29
14
28
1.95
8807--8835
14
2.1
14
93
6
51
65
6
0
27
1.18
9162--9211
20
2.4
20
80
6
55
24
16
8
52
1.70
9195--9224
14
2.1
14
93
0
51
30
13
6
50
1.67
10488--10692
108
1.9
108
91
1
340
37
11
9
41
1.74

Tables:   1

The End!