Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014376.1 Corchorus olitorius cultivar O-4 contig14409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60190

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7367--7400
5
6.8
5
87
12
52
0
14
0
85
0.60
7360--7400
20
2.2
19
91
8
66
0
14
0
85
0.60
14473--14523
3
16.7
3
76
11
50
31
31
3
33
1.76
18496--18713
109
2.0
109
91
1
357
34
18
16
29
1.93
24728--24806
25
3.2
25
69
25
78
45
26
7
20
1.77
24712--24810
48
2.1
48
96
0
180
46
23
7
23
1.76
24712--24789
26
3.2
26
65
26
69
44
23
6
25
1.76
24736--24810
22
3.2
22
68
26
64
46
24
8
21
1.77
25898--25941
20
2.1
21
91
4
72
4
15
0
79
0.89
36135--36196
27
2.3
27
80
0
70
20
20
43
14
1.87
58369--58406
20
1.9
20
94
0
67
50
23
0
26
1.50

Tables:   1

The End!