Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014378.1 Corchorus olitorius cultivar O-4 contig14411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5229

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
983--1033
13
3.8
13
75
19
52
9
0
7
82
0.85
1000--1056
1
57.0
1
76
0
51
3
1
7
87
0.71
989--1056
8
7.6
9
76
14
61
5
1
7
85
0.80
987--1053
28
2.4
28
83
13
86
5
1
7
85
0.81
1000--1056
17
3.4
16
81
13
78
3
1
7
87
0.71
1435--1460
10
2.6
10
100
0
52
7
7
0
84
0.77
1434--1474
9
4.6
9
82
11
57
12
9
2
75
1.13
2980--3013
15
2.2
16
94
5
61
64
14
5
14
1.46
4207--4237
16
1.9
16
93
0
53
22
12
25
38
1.90

Tables:   1

The End!