Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014384.1 Corchorus olitorius cultivar O-4 contig14417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40528

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
663--755
30
3.1
30
88
0
141
26
4
27
40
1.75
7372--7404
16
2.1
16
88
5
50
63
12
6
18
1.48
8851--8881
11
2.7
12
90
10
55
38
19
6
35
1.77
8840--8880
11
3.9
11
82
17
52
39
19
7
34
1.80
13565--13643
31
2.5
31
91
0
131
27
30
18
22
1.98
13817--13857
15
2.6
16
84
7
57
60
12
9
17
1.57
15239--15298
29
2.0
30
87
6
86
35
18
8
38
1.81
34700--34730
16
1.9
16
93
0
53
45
12
9
32
1.75
35398--35443
16
2.9
16
75
18
51
54
4
26
15
1.59

Tables:   1

The End!