Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014386.1 Corchorus olitorius cultivar O-4 contig14419, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9490

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1155--1186
16
2.0
16
93
0
55
34
6
15
43
1.72
2774--2846
29
2.4
30
81
6
94
31
28
8
31
1.86
7790--7821
16
2.0
16
93
0
55
31
12
9
46
1.73
8692--8770
40
2.0
40
87
5
115
43
10
10
36
1.72
8692--8835
22
6.8
22
71
15
81
40
13
11
34
1.80
8729--8865
44
3.1
43
74
10
125
37
17
10
33
1.85
8949--8998
26
1.9
26
91
0
82
28
32
10
30
1.89
9028--9174
22
6.7
22
68
7
84
32
13
12
40
1.83
9060--9159
44
2.3
44
80
3
103
32
14
14
40
1.85

Tables:   1

The End!