Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014399.1 Corchorus olitorius cultivar O-4 contig14432, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43798

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1673--1721
24
2.0
25
84
4
64
18
6
6
69
1.31
3160--3197
13
2.9
13
81
14
51
47
7
5
39
1.55
4626--4706
40
2.0
40
95
0
144
29
17
24
28
1.97
5854--5905
26
2.0
26
100
0
104
23
19
11
46
1.82
11692--11731
16
2.5
16
100
0
80
25
30
20
25
1.99
27781--27910
65
2.0
65
93
0
224
22
26
31
20
1.98
36435--36564
65
2.0
65
92
0
215
21
29
26
23
1.99
36754--36795
21
2.0
21
95
0
75
35
28
16
19
1.93
36894--36952
30
2.0
30
93
6
102
18
35
18
27
1.94
37306--37410
33
3.2
33
79
2
113
44
20
7
26
1.78

Tables:   1

The End!