Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014406.1 Corchorus olitorius cultivar O-4 contig14439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13004

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
609--649
2
20.0
2
95
5
73
48
0
2
48
1.14
5866--5899
15
2.2
16
89
5
52
67
8
8
14
1.41
7936--7988
12
4.3
12
75
13
54
11
41
41
5
1.64
7928--8011
37
2.3
37
89
0
132
14
39
39
7
1.73
7942--7997
25
2.2
25
78
6
60
10
39
44
5
1.62
8065--8105
19
2.2
19
91
8
66
73
0
21
4
1.02
12653--12678
3
8.7
3
100
0
52
65
0
0
34
0.93

Tables:   1

The End!