Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014408.1 Corchorus olitorius cultivar O-4 contig14441, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7509

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
801--830
2
15.5
2
93
6
53
46
0
0
53
1.00
3528--3575
20
2.4
20
92
0
78
43
12
12
31
1.80
4843--4869
13
2.1
13
100
0
54
40
7
7
44
1.60
5652--5699
21
2.3
21
88
0
69
43
14
12
29
1.82
6270--6302
10
3.3
10
100
0
66
90
9
0
0
0.44
6563--6661
31
3.3
31
73
11
114
27
19
20
33
1.96

Tables:   1

The End!