Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014415.1 Corchorus olitorius cultivar O-4 contig14448, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35967

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2351--2424
32
2.3
32
81
9
89
28
24
25
21
1.99
2620--2691
33
2.2
33
100
0
144
16
27
27
27
1.97
2650--2874
109
2.1
109
100
0
450
24
21
26
27
1.99
9007--9106
29
3.5
27
70
18
69
3
40
5
52
1.39
9363--9418
16
3.5
17
88
9
57
37
0
1
60
1.07
9353--9424
31
2.4
29
80
14
85
31
0
2
65
1.07
9368--9418
3
17.3
3
86
11
70
35
0
1
62
1.06
9370--9427
12
4.5
13
81
10
57
32
0
1
65
1.03
11306--11366
28
2.3
27
82
5
70
27
11
6
54
1.61
11474--11755
137
2.1
137
97
0
530
51
21
4
22
1.65
18047--18133
16
5.5
15
78
8
93
3
14
40
41
1.63
18047--18125
31
2.5
31
83
2
95
3
13
39
43
1.63
21128--21199
32
2.2
32
97
0
135
27
27
20
23
1.99
28047--28080
17
2.0
17
100
0
68
41
29
5
23
1.78
29214--29371
83
1.9
84
85
5
221
43
4
17
34
1.69
34083--34145
31
2.1
30
90
3
99
33
44
7
14
1.74

Tables:   1

The End!