Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014418.1 Corchorus olitorius cultivar O-4 contig14451, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34763

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
18
2.0
19
94
5
67
27
10
2
59
1.44
49--139
8
11.6
8
74
6
53
24
10
0
64
1.25
74--152
4
19.2
4
70
14
54
20
7
0
72
1.09
73--153
42
2.0
41
88
11
121
19
8
0
71
1.11
1547--1590
19
2.3
19
96
4
79
27
4
27
40
1.75
8403--8434
13
2.4
13
94
5
55
31
12
0
56
1.37
8403--8434
7
4.7
7
92
7
57
31
12
0
56
1.37
24410--24455
23
2.0
23
100
0
92
26
26
17
30
1.97
30007--30212
22
9.6
22
75
12
160
40
17
9
32
1.82
30007--30212
44
4.8
44
74
8
183
40
17
9
32
1.82
30006--30211
82
2.4
85
80
8
233
40
16
10
32
1.82
30261--30313
22
2.4
22
78
6
54
32
26
3
37
1.74
30458--30563
44
2.4
44
80
3
106
36
12
11
39
1.79
30532--30585
22
2.5
22
79
11
58
29
11
14
44
1.80
31000--31025
2
13.0
2
100
0
52
50
0
0
50
1.00
32737--32779
12
3.8
12
81
12
54
76
0
23
0
0.78
32731--32790
22
2.7
22
80
17
70
76
1
20
1
0.96
32726--32784
26
2.3
25
80
11
66
76
0
18
5
0.97

Tables:   1

The End!