Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014420.1 Corchorus olitorius cultivar O-4 contig14453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7330

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73--143
22
3.3
22
80
2
81
49
18
2
29
1.62
771--802
2
16.0
2
100
0
64
50
0
0
50
1.00
1165--1229
20
3.2
20
79
12
69
41
10
3
44
1.55
1317--1363
22
2.1
23
84
7
62
48
19
6
25
1.72
1425--1569
41
3.4
45
79
11
128
38
16
8
36
1.79
1429--1787
22
16.6
21
71
11
167
38
16
6
37
1.76
1425--1671
63
3.9
62
76
9
214
38
17
7
36
1.78
1920--1997
22
3.7
22
76
5
72
37
10
12
39
1.78
2013--2387
22
17.0
21
70
16
149
36
17
9
36
1.83
2036--2297
44
5.9
43
74
14
185
34
17
10
38
1.83
2217--2270
27
2.0
27
92
0
90
33
12
5
48
1.65
2324--2394
21
3.3
22
82
7
83
43
18
9
28
1.81
3432--3468
2
20.0
2
84
15
53
54
0
0
45
1.00
5259--5309
25
2.0
26
88
7
77
43
3
9
43
1.56
6122--6179
19
2.9
21
74
10
66
32
22
8
36
1.85

Tables:   1

The End!