Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014422.1 Corchorus olitorius cultivar O-4 contig14455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5848

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115--173
30
2.1
28
84
12
77
40
0
11
47
1.40
2856--2904
2
24.5
2
100
0
98
0
0
48
51
1.00
3515--3691
94
1.9
94
82
6
225
36
7
20
35
1.82
3319--3796
22
21.5
22
71
10
229
38
9
17
34
1.83
3608--3824
44
4.9
44
76
2
166
32
11
18
37
1.86
3654--3824
89
1.9
88
81
5
202
33
12
16
37
1.86
4710--4807
48
2.0
48
94
0
169
32
11
6
50
1.63

Tables:   1

The End!