Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014428.1 Corchorus olitorius cultivar O-4 contig14461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30329

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
736--846
56
2.0
56
98
0
213
30
16
10
42
1.82
2159--2219
29
2.1
29
96
0
113
26
6
26
40
1.80
3378--3465
30
2.9
30
73
9
90
28
20
20
30
1.98
18490--18556
28
2.4
28
82
5
73
38
11
16
32
1.85
24535--24618
28
3.0
29
86
6
95
36
14
14
34
1.86
24559--24622
28
2.3
28
94
0
110
32
14
17
35
1.89
24723--24751
2
14.5
2
100
0
58
48
0
0
51
1.00
29137--29178
20
2.1
20
86
0
57
19
19
30
30
1.96

Tables:   1

The End!