Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014429.1 Corchorus olitorius cultivar O-4 contig14462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17825

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4961--5000
18
2.2
19
95
4
73
2
22
0
75
0.93
7017--7062
15
3.1
15
96
0
83
8
23
34
32
1.86
7019--7065
3
15.7
3
86
0
67
6
25
34
34
1.81
8693--8727
9
3.9
9
88
0
52
0
20
34
45
1.51
12430--12512
18
4.6
18
71
11
53
6
40
6
46
1.53
12431--12476
12
3.8
12
85
0
56
6
39
4
50
1.48
13766--13809
15
3.1
14
87
6
63
56
0
4
38
1.20
16319--16380
13
5.1
13
75
19
55
58
1
1
38
1.18
16319--16380
16
3.9
16
78
17
67
58
1
1
38
1.18
16321--16380
18
3.5
18
73
17
65
58
1
1
38
1.18
16329--16384
21
2.7
21
86
8
71
57
1
3
37
1.27
16600--16647
2
26.0
2
76
23
52
52
2
0
45
1.12
16600--16647
7
6.5
8
76
23
52
52
2
0
45
1.12
16886--16923
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!