Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014431.1 Corchorus olitorius cultivar O-4 contig14464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28370

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33--85
11
4.9
10
76
13
52
13
13
20
52
1.73
150--214
30
2.2
30
86
5
87
49
1
4
44
1.32
136--220
30
2.8
29
76
18
75
49
2
3
44
1.32
2660--2704
19
2.4
19
100
0
90
53
4
26
15
1.61
4667--4700
3
11.0
3
93
6
59
0
32
0
67
0.91
5852--5881
5
6.0
5
100
0
60
0
0
20
80
0.72
11957--11987
7
4.6
7
96
4
55
61
22
16
0
1.34
15230--15304
28
2.5
29
85
8
89
24
9
36
30
1.87
17068--17098
14
2.2
14
94
0
53
58
6
3
32
1.40

Tables:   1

The End!