Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014437.1 Corchorus olitorius cultivar O-4 contig14470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11889

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--43
2
21.5
2
90
0
68
51
0
0
48
1.00
1496--1544
24
2.0
25
88
4
73
42
30
8
18
1.79
1507--1554
24
1.9
24
83
8
60
47
33
2
16
1.58
8495--8520
3
8.7
3
100
0
52
69
0
0
30
0.89
9505--9640
36
3.8
36
95
1
229
27
23
32
16
1.96
9507--9640
71
1.9
71
93
0
232
27
23
32
16
1.96
9818--9851
12
2.8
12
86
0
50
17
47
2
32
1.63
9984--10093
54
2.0
56
87
5
161
25
12
38
23
1.90

Tables:   1

The End!