Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014443.1 Corchorus olitorius cultivar O-4 contig14476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25884

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
884--918
18
1.9
18
94
0
61
54
20
0
25
1.45
5540--5588
19
2.7
19
79
14
52
57
0
2
40
1.10
9902--9974
29
2.5
29
84
2
92
39
28
13
17
1.88
10378--10454
29
2.6
30
75
6
84
16
16
25
40
1.90
18614--18722
53
2.1
53
92
0
182
26
8
14
50
1.71
21326--21363
15
2.6
15
83
4
51
36
10
10
42
1.74
23475--23550
35
2.1
36
90
2
118
30
7
5
56
1.50
24484--24518
18
1.9
18
100
0
70
37
17
28
17
1.92
24759--24806
24
2.0
24
100
0
96
41
4
12
41
1.62
24804--24847
12
3.8
12
90
3
54
59
0
4
36
1.18
24802--24847
24
1.9
24
86
0
65
56
0
6
36
1.25

Tables:   1

The End!