Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014447.1 Corchorus olitorius cultivar O-4 contig14480, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35795

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4607--4647
13
2.9
15
85
14
59
26
2
17
53
1.56
5204--5313
37
3.1
34
84
6
87
40
22
14
22
1.90
5180--5351
74
2.3
73
81
7
188
37
21
15
25
1.92
5221--5358
37
3.8
37
92
3
210
38
19
14
27
1.91
6087--6150
21
3.0
20
78
17
67
56
20
7
15
1.64
18819--18894
28
2.8
28
86
4
75
17
43
5
34
1.71
18830--18894
28
2.4
28
92
2
105
18
44
4
32
1.70
19810--19850
21
1.9
22
90
5
66
19
24
12
43
1.85
21789--21840
27
1.9
27
92
0
86
34
28
11
25
1.91
21922--22539
99
6.2
99
91
1
970
33
20
15
29
1.94
22159--22522
53
7.3
53
67
26
249
32
21
16
29
1.95
23177--23213
2
18.5
2
100
0
74
51
0
0
48
1.00
23588--23626
20
2.0
20
85
10
53
15
5
15
64
1.46
33951--33975
12
2.1
12
100
0
50
16
16
8
60
1.58

Tables:   1

The End!