Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014457.1 Corchorus olitorius cultivar O-4 contig14490, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7796

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
627--708
27
3.0
27
85
7
121
19
36
26
17
1.94
3575--3731
21
7.5
21
85
1
199
26
12
21
40
1.88
3900--3933
16
2.1
16
94
0
59
38
8
0
52
1.33
6495--6561
21
3.2
21
64
16
57
50
14
5
28
1.66
6482--6562
42
1.9
42
100
0
162
46
14
7
30
1.72
7600--7637
2
18.5
2
89
5
58
47
5
0
47
1.24
7661--7721
32
1.9
32
93
0
104
26
19
6
47
1.74

Tables:   1

The End!