Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014464.1 Corchorus olitorius cultivar O-4 contig14497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11317

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5101--5221
2
66.0
2
67
19
50
49
4
0
45
1.27
5101--5221
9
13.2
10
66
18
50
49
4
0
45
1.27
5101--5147
18
2.5
19
82
10
60
46
2
0
51
1.13
5101--5199
22
4.5
22
70
19
66
48
5
1
45
1.31
5110--5221
23
4.6
25
68
24
78
50
4
0
44
1.28
7621--7653
17
1.9
17
88
11
50
15
0
9
75
1.03
7995--8082
28
3.1
28
61
6
70
34
27
1
37
1.64
7975--8084
56
2.0
56
100
0
220
35
25
1
37
1.67
8961--9074
56
2.0
56
98
0
219
34
24
1
39
1.66
9141--9220
42
1.9
42
97
0
151
30
7
15
47
1.72

Tables:   1

The End!