Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014477.1 Corchorus olitorius cultivar O-4 contig14510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12183

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
20.0
2
100
0
80
50
0
0
50
1.00
203--246
16
2.8
16
92
0
70
9
13
40
36
1.76
810--970
87
1.9
87
97
0
304
17
19
21
41
1.90
1363--1403
20
2.2
19
86
8
57
41
14
17
26
1.88
9084--9131
11
4.5
11
76
10
55
45
0
8
45
1.33
9069--9129
26
2.3
27
86
11
90
47
0
9
42
1.36
10070--10099
1
30.0
1
100
0
60
100
0
0
0
0.00
11761--11843
24
3.7
21
73
22
71
54
2
0
43
1.13
11774--11838
19
3.6
18
70
16
53
55
3
0
41
1.15
11762--11843
12
6.0
14
70
23
59
54
2
0
42
1.13
11866--11891
12
2.2
12
100
0
52
34
34
15
15
1.89

Tables:   1

The End!