Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014481.1 Corchorus olitorius cultivar O-4 contig14514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18735

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1111--4506
333
10.2
331
78
9
2986
32
14
15
36
1.88
1111--4506
667
5.1
661
79
9
3205
32
14
15
36
1.88
4905--4976
37
1.9
37
91
0
117
33
12
25
29
1.92
5195--5318
62
2.1
58
86
6
167
40
25
8
26
1.83
5504--6275
323
2.4
328
81
6
852
33
12
15
38
1.86
11939--11983
22
2.0
22
100
0
90
28
31
4
35
1.77
12834--13000
31
5.5
31
73
12
116
29
17
16
36
1.92
12831--12993
60
2.7
59
86
3
227
28
17
17
36
1.93
14917--14942
11
2.4
11
100
0
52
7
15
7
69
1.35
15702--15743
15
2.7
15
92
3
66
11
9
14
64
1.50
16083--16155
23
3.3
20
80
16
74
39
10
13
35
1.80
16081--16147
24
2.9
24
86
10
95
43
10
13
32
1.78

Tables:   1

The End!