Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014497.1 Corchorus olitorius cultivar O-4 contig14530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24012

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--44
1
44.0
1
100
0
88
0
0
0
100
0.00
4069--4164
48
2.0
49
91
2
158
28
12
34
25
1.92
4471--4496
13
2.0
13
100
0
52
23
7
7
61
1.49
4509--4572
27
2.3
28
89
5
103
29
6
23
40
1.79
10537--10589
20
2.5
22
76
17
58
39
9
9
41
1.70
12575--12623
24
2.0
24
100
0
98
36
16
16
30
1.91
16710--16776
33
2.0
33
94
0
116
23
19
26
29
1.98
19378--19433
27
2.1
27
100
0
112
42
0
35
21
1.53

Tables:   1

The End!