Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014498.1 Corchorus olitorius cultivar O-4 contig14531, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23623

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4619--4674
5
10.6
5
78
14
51
60
0
33
5
1.19
4619--4675
28
2.1
28
83
6
73
61
0
33
5
1.18
6586--6636
26
2.0
26
84
7
68
54
11
5
27
1.59
6865--6900
18
2.0
18
100
0
72
38
27
5
27
1.79
6929--6977
25
2.0
25
84
8
64
30
10
14
44
1.78
8356--8666
22
14.0
22
72
10
220
38
9
17
34
1.82
8463--8670
114
1.8
114
86
4
303
38
8
20
32
1.83
9241--9278
11
3.5
11
89
10
51
39
0
2
57
1.12
11121--11159
15
2.5
16
79
4
53
15
23
25
35
1.94
15428--15457
2
14.5
2
93
6
51
3
46
0
50
1.18
15953--15994
18
2.4
18
80
4
50
78
2
19
0
0.86
16000--16056
29
2.0
29
89
0
87
15
38
38
7
1.75
17448--17489
13
3.3
12
83
16
50
33
0
9
57
1.31
19438--19491
23
2.3
23
84
6
65
24
22
5
48
1.72

Tables:   1

The End!