Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014503.1 Corchorus olitorius cultivar O-4 contig14536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7432

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--42
2
15.0
2
92
0
51
3
46
0
50
1.18
1512--1554
16
2.8
16
89
6
63
0
23
0
76
0.78
2879--3086
103
2.0
103
95
0
371
42
5
7
44
1.57
3145--3225
39
2.0
40
85
2
110
49
8
4
37
1.55
3337--3745
202
2.0
202
97
0
764
36
11
8
44
1.70
4259--4328
36
1.9
36
94
0
122
58
8
11
21
1.59
7204--7231
2
14.0
2
100
0
56
50
0
0
50
1.00
7276--7321
19
2.3
21
77
11
51
63
4
0
32
1.14

Tables:   1

The End!