Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014504.1 Corchorus olitorius cultivar O-4 contig14537, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14680

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
396--463
20
3.2
20
64
11
55
38
11
2
47
1.55
379--468
43
2.1
43
100
0
180
41
11
4
43
1.60
1084--1147
30
2.1
30
94
0
110
31
7
26
34
1.85
1861--1906
24
2.0
23
95
4
83
26
13
17
43
1.85
10115--10157
21
2.0
21
100
0
86
13
37
23
25
1.92
11957--11990
2
17.5
2
87
6
52
50
0
0
50
1.00

Tables:   1

The End!