Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014511.1 Corchorus olitorius cultivar O-4 contig14544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21342

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1037--1485
31
14.6
31
91
2
631
28
18
20
33
1.96
1036--1485
92
4.9
92
89
1
629
28
18
20
33
1.96
6441--6470
10
2.9
10
95
5
51
33
16
0
50
1.46
6438--6468
16
2.0
15
93
6
53
32
19
0
48
1.49
6597--6791
63
3.2
62
64
17
154
42
8
1
48
1.41
6589--6777
58
3.2
58
64
22
147
39
8
1
50
1.41
6558--6794
121
2.0
121
98
0
456
40
9
1
49
1.43
8807--8831
13
1.9
13
100
0
50
44
0
0
56
0.99
15466--15494
4
7.2
4
100
0
58
51
0
24
24
1.48
17951--18996
433
2.4
433
84
3
1323
41
14
13
30
1.85

Tables:   1

The End!