Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014512.1 Corchorus olitorius cultivar O-4 contig14545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29623

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4533--4561
14
2.1
14
100
0
58
24
13
20
41
1.89
5367--5415
25
2.0
25
95
0
89
40
20
26
12
1.87
14564--14652
30
2.8
33
77
18
105
47
1
4
47
1.30
20755--20821
31
2.2
31
97
0
125
32
20
20
25
1.97
23336--23406
33
2.2
33
92
2
117
25
18
9
46
1.79
26336--26449
58
2.0
58
98
0
219
23
14
19
42
1.87
27240--27553
41
7.6
41
88
3
434
29
13
18
37
1.90
27657--27689
16
2.1
16
94
0
57
18
21
12
48
1.80

Tables:   1

The End!