Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014527.1 Corchorus olitorius cultivar O-4 contig14560, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57382

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3208--3318
31
3.5
31
77
1
114
34
22
23
19
1.97
21040--21067
2
14.0
2
100
0
56
50
0
0
50
1.00
26268--26309
11
3.7
11
83
3
57
0
4
16
78
0.91
26268--26309
6
7.3
6
84
10
52
0
4
16
78
0.91
27248--27280
17
1.9
17
88
11
50
48
6
12
33
1.65
27980--28028
19
2.7
17
77
22
55
24
4
0
71
1.03
41211--41248
2
19.5
2
84
15
53
44
2
0
52
1.14
46625--46696
32
2.3
31
82
2
81
18
23
23
34
1.96
48665--48741
17
4.6
16
74
20
52
48
1
1
49
1.17
48667--48746
41
2.0
41
87
5
117
47
1
1
50
1.17
54848--56859
335
6.1
333
88
4
3004
31
16
15
36
1.90
54848--56859
661
3.0
660
89
3
3060
31
16
15
36
1.90
57357--57382
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!