Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014532.1 Corchorus olitorius cultivar O-4 contig14565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10059

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7983--8062
29
2.7
30
88
3
108
28
18
12
40
1.87
8129--8185
29
2.0
28
86
10
80
29
19
28
22
1.98
8162--8229
31
2.2
31
86
0
91
42
16
17
23
1.88
8933--9036
49
2.1
49
87
7
149
32
6
0
59
1.30
9214--9247
7
5.0
7
92
7
61
85
0
14
0
0.60
9214--9247
13
2.5
14
95
4
61
85
0
14
0
0.60
9290--9387
32
3.1
31
89
4
142
32
14
10
42
1.79
9516--9588
29
2.5
30
88
2
103
41
12
15
31
1.84

Tables:   1

The End!