Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014536.1 Corchorus olitorius cultivar O-4 contig14569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39361

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191--435
28
8.6
28
79
7
235
38
22
20
17
1.93
218--435
57
3.8
57
92
2
330
38
22
20
18
1.93
191--449
29
9.1
28
79
6
227
38
22
21
18
1.94
727--944
58
3.8
58
93
1
341
40
15
16
27
1.88
17622--17792
29
5.8
28
79
10
173
43
22
14
19
1.87
17622--17785
58
2.8
59
89
7
244
44
23
14
18
1.85
23813--23871
30
2.0
30
83
6
75
23
18
16
40
1.91
24080--24153
28
2.7
28
91
8
125
13
13
28
44
1.82
30683--30716
13
2.7
13
95
4
61
26
23
14
35
1.94
30837--30862
13
2.0
13
100
0
52
53
0
0
46
1.00

Tables:   1

The End!